C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: phospholipase C, gamma 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000174885 Plcg1-011 ENSMUSG00000016933 10090 + 2:160731699-160747888 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastLungOvaryENSMUST00000174885
Transcript ID Adrenal Breast Lung Ovary
ENSMUST00000174885 50.842±15.07 35.281±3.63 64.759±0.00 64.489±6.41

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008TO CIL_0008TO_0002 VISTA 2:160151305-160752587
CIL_0009AU CIL_0009AU_0002 VISTA 2:160192291-160794448
CIL_0007XA CIL_0007XA_0002 VISTA 2:160203620-160804635
CIL_0008MI CIL_0008MI_0002 VISTA 2:160213670-160814864
CIL_0008QO CIL_0008QO_0002 VISTA 2:160215694-160817266
CIL_0009AV CIL_0009AV_0002 VISTA 2:160278530-160880585
CIL_0004EC CIL_0004EC_0002 CGP 2:160645888-160775760
CIL_0002I4 CIL_0002I4_0002 CGP 2:160731300-160872998

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001701 IMP in utero embryonic development
GO:0005737 ISO cytoplasm
GO:0005911 IDA cell-cell junction
GO:0008152 IEA metabolic process
GO:0035254 IPI glutamate receptor binding
GO:0050852 IDA T cell receptor signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000244007 PLCG1-013 protein_coding Homo_sapiens 0 431
ENST00000373271 PLCG1-005 protein_coding Homo_sapiens 0 435
ENST00000483646 PLCG1-007 processed_transcript Homo_sapiens 0 302
ENST00000490253 PLCG1-006 retained_intron Homo_sapiens 0 431

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