C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: negative elongation factor complex member E, Rdbp
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000174888 Nelfe-006 ENSMUSG00000024369 10090 + 17:34853936-34854526 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainLiverMuscleOvaryPlacentaTestisENSMUST00000174888
Transcript ID Adrenal Brain Liver Muscle Ovary Placenta Testis
ENSMUST00000174888 5.289±0.00 12.310±2.29 12.963±0.00 2.556±0.00 35.029±2.32 46.479±13.28 92.870±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002RU CIL_0002RU_0002 CGP 17:34839228-34856372

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000375425 NELFE-013 protein_coding Homo_sapiens 0 348
ENST00000375429 NELFE-001 protein_coding Homo_sapiens 0 348
ENST00000383174 NELFE-001 protein_coding Homo_sapiens 0 348
ENST00000383343 NELFE-001 protein_coding Homo_sapiens 0 348
ENST00000411745 NELFE-011 protein_coding Homo_sapiens 0 257
ENST00000418423 NELFE-010 protein_coding Homo_sapiens 5e-20 102
ENST00000424762 NELFE-007 protein_coding Homo_sapiens 0 348
ENST00000424967 NELFE-010 protein_coding Homo_sapiens 5e-20 102
ENST00000425810 NELFE-007 protein_coding Homo_sapiens 0 348
ENST00000429857 NELFE-001 protein_coding Homo_sapiens 0 348
ENST00000434518 NELFE-011 protein_coding Homo_sapiens 0 257
ENST00000435435 NELFE-010 protein_coding Homo_sapiens 5e-20 102
ENST00000436289 NELFE-010 protein_coding Homo_sapiens 9e-33 145
ENST00000437732 NELFE-011 protein_coding Homo_sapiens 0 257
ENST00000440478 NELFE-007 protein_coding Homo_sapiens 0 348
ENST00000441998 NELFE-007 protein_coding Homo_sapiens 0 348
ENST00000443464 NELFE-007 protein_coding Homo_sapiens 0 348
ENST00000444811 NELFE-012 protein_coding Homo_sapiens 0 348
ENST00000448628 NELFE-001 protein_coding Homo_sapiens 0 348
ENST00000449057 NELFE-010 protein_coding Homo_sapiens 5e-20 102
ENST00000452147 NELFE-007 protein_coding Homo_sapiens 0 348
ENST00000453084 NELFE-011 protein_coding Homo_sapiens 0 257
ENST00000454913 NELFE-011 protein_coding Homo_sapiens 0 257
ENST00000456263 NELFE-011 protein_coding Homo_sapiens 0 257
ENST00000456281 NELFE-010 protein_coding Homo_sapiens 5e-20 102
ENST00000457397 NELFE-001 protein_coding Homo_sapiens 0 348
ENST00000459932 NELFE-003 retained_intron Homo_sapiens 0 348
ENST00000463283 NELFE-003 retained_intron Homo_sapiens 0 348
ENST00000463500 NELFE-002 retained_intron Homo_sapiens 0 364
ENST00000466654 NELFE-002 retained_intron Homo_sapiens 0 364
ENST00000472314 NELFE-003 retained_intron Homo_sapiens 0 348
ENST00000481121 NELFE-002 retained_intron Homo_sapiens 0 364
ENST00000482784 NELFE-002 retained_intron Homo_sapiens 0 364
ENST00000485782 NELFE-002 retained_intron Homo_sapiens 0 364
ENST00000485872 NELFE-002 retained_intron Homo_sapiens 0 364
ENST00000488426 NELFE-003 retained_intron Homo_sapiens 0 348
ENST00000492185 NELFE-004 retained_intron Homo_sapiens 0 364
ENST00000494485 NELFE-003 retained_intron Homo_sapiens 0 348
ENST00000496691 NELFE-003 retained_intron Homo_sapiens 0 348

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