C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 20689
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000176033 Gm20689-001 ENSMUSG00000093384 10090 - 3:68900171-68900449 processed_pseudogene

Mus musculus EnsemblGRCm38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBreastColonHeartKidneyLiverLungMuscleOvaryTestisENSMUST00000176033
Transcript ID Adipose Breast Colon Heart Kidney Liver Lung Muscle Ovary Testis
ENSMUST00000176033 0.870±0.49 1.078±0.61 1.891±0.00 0.789±0.01 0.848±0.14 0.263±0.15 1.299±0.69 0.351±0.00 2.254±0.00 1.016±0.64

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004JR CIL_0004JR_0003 CGP 3:68892499-69034623

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000321437 RAB8B-001 protein_coding Homo_sapiens 0 420
ENST00000558119 RAB8B-004 nonsense_mediated_decay Homo_sapiens 0 244
ENST00000558990 RAB8B-002 nonsense_mediated_decay Homo_sapiens 0 420
ENST00000559006 RAB8B-005 protein_coding Homo_sapiens 0 420
ENST00000559927 RAB8B-003 nonsense_mediated_decay Homo_sapiens 0 420

Loading