C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger protein 169
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000176176 Zfp169-001 ENSMUSG00000050954 10090 - 13:48487647-48513436 protein_coding

Mus musculus EnsemblGRCm38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastColonHeartKidneyLiverLungOvaryENSMUST00000176176
Transcript ID Adrenal Breast Colon Heart Kidney Liver Lung Ovary
ENSMUST00000176176 0.735±0.20 1.382±0.09 1.140±0.17 0.379±0.02 0.579±0.00 0.576±0.04 1.613±0.04 1.692±0.49

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009DD CIL_0009DD_0002 VISTA 13:48083545-48684932
CIL_0008XX CIL_0008XX_0002 VISTA 13:48265958-48867063
CIL_0008WO CIL_0008WO_0002 VISTA 13:48416450-49018010
CIL_0008QG CIL_0008QG_0002 VISTA 13:48479624-49081302

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0003676 IEA nucleic acid binding
GO:0005575 ND cellular_component
GO:0005622 IEA intracellular
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000460728 TRIM16-006 processed_transcript Homo_sapiens 0.0000000000002 81
ENST00000494759 TRIM16-003 nonsense_mediated_decay Homo_sapiens 0.0000000000001 81
ENST00000571708 TRIM16L-011 protein_coding Homo_sapiens 2e-16 92
ENST00000577873 RP11-815I9.5-001 transcribed_processed_pseudogene Homo_sapiens 0.000000000001 75
ENST00000578086 TRIM16L-016 processed_transcript Homo_sapiens 0.000000000002 75
ENST00000579535 TRIM16-015 processed_transcript Homo_sapiens 3e-16 90
ENST00000581224 TRIM16-017 processed_transcript Homo_sapiens 4e-16 90
ENST00000581904 TRIM16L-015 processed_transcript Homo_sapiens 8e-17 92
ENST00000582182 TRIM16-027 processed_transcript Homo_sapiens 0.000000000008 75
ENST00000582708 TRIM16-016 processed_transcript Homo_sapiens 0.00000000009 71

Loading