C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tripartite motif containing 16-like
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000571708 TRIM16L-011 ENSG00000108448 9606 + 17:18699215-18735490 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainColonKidneyLiverLungOvaryPlacentaTestisENST00000571708
Transcript ID Adipose Adrenal Bladder Brain Colon Kidney Liver Lung Ovary Placenta Testis
ENST00000571708 0.340±0.00 0.399±0.00 0.051±0.00 0.487±0.00 0.229±0.11 0.582±0.00 0.224±0.00 0.357±0.00 0.313±0.11 0.268±0.00 0.476±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000DU CIL_0000DU_0001 CGP 17:18658429-18736118
CIL_0005CX CIL_0005CX_0001 CGP 17:18697998-18779349

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005737 IEA cytoplasm

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000108703 Trim16-002 protein_coding Mus_musculus 0 1197
ENSMUST00000055006 Trim16-001 protein_coding Mus_musculus 0 1197
ENSMUST00000128623 Trim16-005 processed_transcript Mus_musculus 0 1110
ENSMUST00000072639 Trim16-004 protein_coding Mus_musculus 0 952
ENSMUST00000110110 Zfp169-201 protein_coding Mus_musculus 2e-16 92
ENSMUST00000167682 Zfp169-202 protein_coding Mus_musculus 2e-16 92
ENSMUST00000177474 Zfp169-003 retained_intron Mus_musculus 2e-16 92
ENSMUST00000176949 Zfp169-004 protein_coding Mus_musculus 2e-16 92
ENSMUST00000176996 Zfp169-005 protein_coding Mus_musculus 2e-16 92
ENSMUST00000177530 Zfp169-002 protein_coding Mus_musculus 2e-16 92
ENSMUST00000176176 Zfp169-001 protein_coding Mus_musculus 2e-16 92

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