C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: acetyl-Coenzyme A acyltransferase 1A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000176397 Acaa1a-004 ENSMUSG00000036138 10090 + 9:119341515-119350033 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainOvaryPlacentaENSMUST00000176397
Transcript ID Brain Ovary Placenta
ENSMUST00000176397 12.802±0.00 54.181±0.00 56.309±20.50

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008BE CIL_0008BE_0002 VISTA 9:119196374-119798584
CIL_000131 CIL_000131_0002 CGP 9:119238432-119341411

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003985 TAS acetyl-CoA C-acetyltransferase activity
GO:0005739 IDA mitochondrion
GO:0005777 TAS peroxisome
GO:0006631 TAS fatty acid metabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000301810 ACAA1-002 protein_coding Homo_sapiens 0 1003
ENST00000333167 ACAA1-001 protein_coding Homo_sapiens 0 405
ENST00000411549 ACAA1-003 nonsense_mediated_decay Homo_sapiens 0 303
ENST00000418880 ACAA1-017 nonsense_mediated_decay Homo_sapiens 2e-24 117
ENST00000421218 ACAA1-014 protein_coding Homo_sapiens 0 521
ENST00000423611 ACAA1-009 nonsense_mediated_decay Homo_sapiens 0 303
ENST00000440176 ACAA1-004 nonsense_mediated_decay Homo_sapiens 0 303
ENST00000447223 ACAA1-013 nonsense_mediated_decay Homo_sapiens 0 303
ENST00000450296 ACAA1-007 protein_coding Homo_sapiens 0 303
ENST00000452171 ACAA1-019 protein_coding Homo_sapiens 0 604
ENST00000469559 ACAA1-006 retained_intron Homo_sapiens 0 303
ENST00000480865 ACAA1-005 processed_transcript Homo_sapiens 0 303

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