C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: LIM homeobox protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000176503 Lhx1-003 ENSMUSG00000018698 10090 - 11:84519706-84522067 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; LungOvaryENSMUST00000176503
Transcript ID Lung Ovary
ENSMUST00000176503 0.051±0.00 0.164±0.08

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008GS CIL_0008GS_0002 VISTA 11:84076005-84677109
CIL_0008DP CIL_0008DP_0002 VISTA 11:84095730-84696774
CIL_00085M CIL_00085M_0002 VISTA 11:84181126-84782244
CIL_00085Q CIL_00085Q_0002 VISTA 11:84196288-84796920
CIL_0007ND CIL_0007ND_007N UCNEbase 11:84271978-84766400
CIL_0007YB CIL_0007YB_0004 VISTA 11:84425827-85026602
CIL_00085R CIL_00085R_0002 VISTA 11:84466073-85066769

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000614239 LHX1-001 protein_coding Homo_sapiens 0 730
ENST00000620305 LHX1-201 protein_coding Homo_sapiens 0 730
ENST00000621767 LHX1-004 protein_coding Homo_sapiens 9e-21 104

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