C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: forkhead box N3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000176928 Foxn3-008 ENSMUSG00000033713 10090 - 12:99388439-99450111 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartKidneyLiverLungOvaryTestisENSMUST00000176928
Transcript ID Adipose Brain Breast Colon Heart Kidney Liver Lung Ovary Testis
ENSMUST00000176928 15.912±0.00 5.183±0.00 21.645±7.47 18.375±1.27 12.613±1.55 17.994±2.73 8.603±0.96 27.885±0.00 34.097±4.86 2.913±0.44

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004KI CIL_0004KI_0002 CGP 12:98920574-99450111
CIL_0008PB CIL_0008PB_0002 VISTA 12:99038620-99641271
CIL_0008OO CIL_0008OO_0002 VISTA 12:99039106-99641370
CIL_0005C7 CIL_0005C7_0002 CGP 12:99194980-99883442

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0043565 IEA sequence-specific DNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000261302 FOXN3-201 protein_coding Homo_sapiens 0 723
ENST00000325117 FOXN3P1-001 processed_pseudogene Homo_sapiens 0 538
ENST00000345097 FOXN3-003 protein_coding Homo_sapiens 0 723
ENST00000553904 FOXN3-006 protein_coding Homo_sapiens 0 285
ENST00000555034 FOXN3-007 protein_coding Homo_sapiens 0 466
ENST00000555353 FOXN3-001 protein_coding Homo_sapiens 0 723
ENST00000555855 FOXN3-005 protein_coding Homo_sapiens 0 752
ENST00000557258 FOXN3-004 protein_coding Homo_sapiens 0 725
ENST00000615335 FOXN3-202 protein_coding Homo_sapiens 0 693

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