C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: aldehyde dehydrogenase 18 family, member A1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000176939 Aldh18a1-007 ENSMUSG00000025007 10090 - 19:40550257-40588369 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000176939
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000176939 4.029±2.89 3.043±1.75 7.333±3.28 4.475±2.14 4.179±1.08 10.223±0.42 1.177±0.43 1.234±0.50 2.569±2.68 1.377±0.38 0.597±0.35 13.958±5.73 7.902±3.11 0.740±0.38

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00095J CIL_00095J_0002 VISTA 19:40075645-40678667
CIL_0007T2 CIL_0007T2_0002 VISTA 19:40167411-40768695
CIL_00067I CIL_00067I_0002 CGP 19:40295049-40588463
CIL_00067D CIL_00067D_0002 CGP 19:40550257-40612233

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004349 IDA glutamate 5-kinase activity
GO:0004350 ISS glutamate-5-semialdehyde dehydrogenase activity
GO:0005524 IEA ATP binding
GO:0005739 IDA mitochondrion
GO:0005743 IEA mitochondrial inner membrane
GO:0006536 ISS glutamate metabolic process
GO:0006561 ISS proline biosynthetic process
GO:0008652 TAS cellular amino acid biosynthetic process
GO:0016310 IDA:IEA phosphorylation
GO:0019240 ISS citrulline biosynthetic process
GO:0055114 IEA oxidation-reduction process
GO:0055129 IEA L-proline biosynthetic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000371221 ALDH18A1-002 protein_coding Homo_sapiens 0 2819
ENST00000371224 ALDH18A1-001 protein_coding Homo_sapiens 0 2796
ENST00000483788 ALDH18A1-004 processed_transcript Homo_sapiens 0 660
ENST00000485428 ALDH18A1-005 processed_transcript Homo_sapiens 0 806
ENST00000489386 ALDH18A1-003 processed_transcript Homo_sapiens 0 484

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