C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: hemicentin 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000177036 Hmcn1-006 ENSMUSG00000066842 10090 - 1:150563684-150583212 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; LiverPlacentaENSMUST00000177036
Transcript ID Liver Placenta
ENSMUST00000177036 0.881±0.00 0.823±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00065A CIL_00065A_0002 CGP 1:150562524-151364422

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005509 IEA calcium ion binding
GO:0005576 IDA extracellular region
GO:0005604 IDA basement membrane
GO:0005938 IDA cell cortex
GO:0008150 ND biological_process
GO:0030054 IDA cell junction

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000271588 HMCN1-001 protein_coding Homo_sapiens 0 399
ENST00000414277 HMCN1-004 protein_coding Homo_sapiens 0 462

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