C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 20605
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000177545 Gm20605-001 ENSMUSG00000029720 10090 + 5:137629175-137642899 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000177545
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000177545 14.222±2.73 14.600±1.26 17.015±2.15 5.908±1.73 30.236±10.24 22.837±4.14 4.611±1.19 8.435±2.12 4.546±2.67 31.565±3.34 5.027±0.88 15.563±3.62 2.820±1.21 6.898±2.67

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000TF CIL_0000TF_0002 CGP 5:137629121-137642899

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000310300 LRCH4-001 protein_coding Homo_sapiens 0 2078
ENST00000467201 LRCH4-003 retained_intron Homo_sapiens 0 606
ENST00000470184 LRCH4-008 retained_intron Homo_sapiens 0 255
ENST00000476881 LRCH4-005 retained_intron Homo_sapiens 0 507
ENST00000485554 LRCH4-012 protein_coding Homo_sapiens 0 401
ENST00000485583 LRCH4-007 retained_intron Homo_sapiens 0 512
ENST00000487697 LRCH4-009 retained_intron Homo_sapiens 0 202
ENST00000490359 LRCH4-011 retained_intron Homo_sapiens 4.06377e-44 182
ENST00000497245 LRCH4-002 protein_coding Homo_sapiens 0 1775
ENST00000619071 LRCH4-201 protein_coding Homo_sapiens 0 985

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