C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: leucine-rich repeats and calponin homology (CH) domain containing 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000467201 LRCH4-003 ENSG00000077454 9606 - 7:100574660-100580873 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastHeartKidneyMuscleOvaryENST00000467201
Transcript ID Bladder Brain Breast Heart Kidney Muscle Ovary
ENST00000467201 0.074±0.00 0.245±0.00 0.584±0.00 0.083±0.00 0.362±0.00 0.117±0.00 0.278±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000177545 Gm20605-001 nonsense_mediated_decay Mus_musculus 0 606
ENSMUST00000031734 Lrch4-001 protein_coding Mus_musculus 0 606
ENSMUST00000175968 Lrch4-003 protein_coding Mus_musculus 0 595
ENSMUST00000176667 Lrch4-002 protein_coding Mus_musculus 0 375
ENSMUST00000176768 Lrch4-008 protein_coding Mus_musculus 0 226
ENSMUST00000177477 Lrch4-006 nonsense_mediated_decay Mus_musculus 0 206
ENSMUST00000176988 Lrch4-005 retained_intron Mus_musculus 4e-18 99

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