C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: predicted gene 4373
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000178571 RP24-542I6.2-001 ENSMUSG00000101545 10090 + 7:31652395-31652950 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderENSMUST00000178571
Transcript ID Bladder
ENSMUST00000178571 0.018±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000229239 GAPDH-001 protein_coding Homo_sapiens 0 326
ENST00000396856 GAPDH-004 protein_coding Homo_sapiens 0 326
ENST00000396858 GAPDH-008 protein_coding Homo_sapiens 0 326
ENST00000396859 GAPDH-003 protein_coding Homo_sapiens 0 326
ENST00000396861 GAPDH-002 protein_coding Homo_sapiens 0 326
ENST00000398586 GAPDHP15-001 processed_pseudogene Homo_sapiens 0 191
ENST00000403475 RP11-378G13.2-001 processed_pseudogene Homo_sapiens 0 222
ENST00000425487 GAPDHP65-001 processed_pseudogene Homo_sapiens 0 331
ENST00000436626 GAPDHP48-001 processed_pseudogene Homo_sapiens 4.99997e-41 172
ENST00000436818 GAPDHP26-001 processed_pseudogene Homo_sapiens 0 226
ENST00000438477 GAPDHP58-001 processed_pseudogene Homo_sapiens 0 243
ENST00000442317 GAPDHP37-001 processed_pseudogene Homo_sapiens 0 230
ENST00000444107 GAPDHP20-001 processed_pseudogene Homo_sapiens 0 219
ENST00000450472 GAPDHP14-001 processed_pseudogene Homo_sapiens 8.99634e-43 178
ENST00000452570 GAPDHP1-001 processed_pseudogene Homo_sapiens 0 315
ENST00000466525 GAPDH-007 retained_intron Homo_sapiens 2e-21 108
ENST00000466588 GAPDH-005 retained_intron Homo_sapiens 0 326
ENST00000474249 GAPDH-006 retained_intron Homo_sapiens 0 326
ENST00000492719 GAPDH-011 retained_intron Homo_sapiens 0 326
ENST00000513513 GAPDHP44-001 processed_pseudogene Homo_sapiens 0 235
ENST00000513953 RP11-44N17.1-001 processed_pseudogene Homo_sapiens 0 204
ENST00000613707 RP11-343D24.1-001 processed_pseudogene Homo_sapiens 0 198
ENST00000619601 GAPDH-201 protein_coding Homo_sapiens 0 326

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