C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: TRAF3 interacting protein 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000367026 TRAF3IP3-012 ENSG00000009790 9606 + 1:209756179-209782320 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; LungOvaryPlacentaTestisENST00000367026
Transcript ID Lung Ovary Placenta Testis
ENST00000367026 1.039±0.00 0.706±0.00 0.453±0.18 0.590±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00089N CIL_00089N_0001 VISTA 1:209189712-209790617
CIL_0007ZL CIL_0007ZL_0001 VISTA 1:209515705-210116479

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000043550 Traf3ip3-001 protein_coding Mus_musculus 0 1027
ENSMUST00000160332 Traf3ip3-004 retained_intron Mus_musculus 0 795
ENSMUST00000160302 Traf3ip3-006 processed_transcript Mus_musculus 0 420
ENSMUST00000162480 Traf3ip3-011 retained_intron Mus_musculus 0 274
ENSMUST00000159805 Traf3ip3-002 retained_intron Mus_musculus 0 231
ENSMUST00000161403 Traf3ip3-003 retained_intron Mus_musculus 0 231
ENSMUST00000159666 Traf3ip3-012 processed_transcript Mus_musculus 5.04467e-44 183
ENSMUST00000178744 A130010J15Rik-201 protein_coding Mus_musculus 5e-29 134
ENSMUST00000110831 A130010J15Rik-001 protein_coding Mus_musculus 5e-29 134
ENSMUST00000161235 A130010J15Rik-002 protein_coding Mus_musculus 5e-29 134
ENSMUST00000160822 A130010J15Rik-003 protein_coding Mus_musculus 5e-29 134

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