C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: TRAF3 interacting protein 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000477431 TRAF3IP3-017 ENSG00000009790 9606 + 1:209768615-209782313 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeENST00000477431
Transcript ID Adipose
ENST00000477431 0.443±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00089N CIL_00089N_0001 VISTA 1:209189712-209790617
CIL_0007ZL CIL_0007ZL_0001 VISTA 1:209515705-210116479

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005634 IEA nucleus
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0043565 IEA sequence-specific DNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000160332 Traf3ip3-004 retained_intron Mus_musculus 0 540
ENSMUST00000043550 Traf3ip3-001 protein_coding Mus_musculus 0 540
ENSMUST00000160302 Traf3ip3-006 processed_transcript Mus_musculus 0 300
ENSMUST00000162480 Traf3ip3-011 retained_intron Mus_musculus 0 270
ENSMUST00000159666 Traf3ip3-012 processed_transcript Mus_musculus 1.96182e-44 183
ENSMUST00000178744 A130010J15Rik-201 protein_coding Mus_musculus 2e-29 134
ENSMUST00000110831 A130010J15Rik-001 protein_coding Mus_musculus 2e-29 134
ENSMUST00000161235 A130010J15Rik-002 protein_coding Mus_musculus 2e-29 134
ENSMUST00000160822 A130010J15Rik-003 protein_coding Mus_musculus 2e-29 134

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