C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RAS guanyl releasing protein 1 (calcium and DAG-regulated)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000310803 RASGRP1-001 ENSG00000172575 9606 - 15:38488103-38564806 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonKidneyLiverLungOvaryPlacentaTestisENST00000310803
Transcript ID Adrenal Brain Breast Colon Kidney Liver Lung Ovary Placenta Testis
ENST00000310803 0.754±0.00 1.464±0.00 1.330±0.00 0.035±0.00 1.787±0.00 0.033±0.00 0.269±0.00 0.108±0.07 0.352±0.23 0.535±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002RQ CIL_0002RQ_0001 CGP 15:38454127-38565575

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001816 IEA cytokine production
GO:0002437 IEA inflammatory response to antigenic stimulus
GO:0005085 IEA:TAS guanyl-nucleotide exchange factor activity
GO:0005509 IEA calcium ion binding
GO:0005622 IEA intracellular
GO:0005783 IEA endoplasmic reticulum
GO:0005794 IEA Golgi apparatus
GO:0005829 TAS cytosol
GO:0005886 TAS plasma membrane
GO:0007165 TAS signal transduction
GO:0007264 IEA small GTPase mediated signal transduction
GO:0007265 IEA Ras protein signal transduction
GO:0007596 TAS blood coagulation
GO:0008289 TAS lipid binding
GO:0014066 IEA regulation of phosphatidylinositol 3-kinase signaling
GO:0016020 TAS membrane
GO:0030154 IEA cell differentiation
GO:0030168 TAS platelet activation
GO:0032252 IEA secretory granule localization
GO:0032856 IEA activation of Ras GTPase activity
GO:0032862 IEA activation of Rho GTPase activity
GO:0035556 IEA intracellular signal transduction
GO:0038095 TAS Fc-epsilon receptor signaling pathway
GO:0042629 IEA mast cell granule
GO:0043303 IEA mast cell degranulation
GO:0045087 TAS innate immune response
GO:0047496 IEA vesicle transport along microtubule
GO:0051056 IEA regulation of small GTPase mediated signal transduction

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000178884 Rasgrp1-201 protein_coding Mus_musculus 0 2689
ENSMUST00000102534 Rasgrp1-001 protein_coding Mus_musculus 0 2689
ENSMUST00000173252 Rasgrp1-006 protein_coding Mus_musculus 0 1589
ENSMUST00000172901 Rasgrp1-004 protein_coding Mus_musculus 0 1589
ENSMUST00000173541 Rasgrp1-005 protein_coding Mus_musculus 0 1589
ENSMUST00000174770 Rasgrp1-003 nonsense_mediated_decay Mus_musculus 0 1589
ENSMUST00000110898 Rasgrp1-002 retained_intron Mus_musculus 0 797

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