C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: trafficking protein particle complex 13
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000179891 Trappc13-201 ENSMUSG00000021711 10090 - 13:104143954-104178407 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000179891
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000179891 4.212±0.78 1.825±0.00 2.795±0.73 3.078±0.35 2.016±0.11 2.996±0.41 1.967±0.64 2.110±0.42 4.387±1.62 6.723±2.94 1.035±0.42

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000231526 TRAPPC13-003 protein_coding Homo_sapiens 0 1467
ENST00000399438 TRAPPC13-001 protein_coding Homo_sapiens 0 1544
ENST00000438419 TRAPPC13-004 protein_coding Homo_sapiens 0 1548
ENST00000504243 TRAPPC13-009 nonsense_mediated_decay Homo_sapiens 0 638
ENST00000504751 TRAPPC13-008 nonsense_mediated_decay Homo_sapiens 0 411
ENST00000505553 TRAPPC13-002 protein_coding Homo_sapiens 0 1476
ENST00000508304 TRAPPC13-013 retained_intron Homo_sapiens 0 730
ENST00000510585 CTC-534A2.2-001 protein_coding Homo_sapiens 3e-20 104
ENST00000512009 TRAPPC13-005 retained_intron Homo_sapiens 0 1112

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