C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 6055
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000180532 Gm6055-001 ENSMUSG00000062081 10090 - 14:48079375-48079752 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000180532
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000180532 5.817±2.03 2.425±0.92 3.071±1.66 2.045±1.60 2.160±0.74 1.259±0.97 1.867±0.38 2.816±1.10 1.664±0.84 1.924±0.50 1.058±0.41 2.960±1.91 0.785±0.24 1.015±0.17

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000604 CIL_000604_0003 CGP 14:47648448-48260883

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000360668 MAP1LC3A-002 protein_coding Homo_sapiens 0 248
ENST00000374837 MAP1LC3A-001 protein_coding Homo_sapiens 0 248
ENST00000397709 MAP1LC3A-003 protein_coding Homo_sapiens 0 248
ENST00000476428 MAP1LC3A-004 processed_transcript Homo_sapiens 0 220

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