C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 3650
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000180600 Gm3650-001 ENSMUSG00000097891 10090 + 18:43472816-43475169 unprocessed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000180600
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000180600 0.426±0.06 0.334±0.18 3.962±0.00 1.261±1.51 0.354±0.23 0.838±0.22 0.370±0.03 0.408±0.26 0.792±0.93 0.297±0.10 0.312±0.16 0.750±0.53 0.669±0.33

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000261866 SPG11-001 protein_coding Homo_sapiens 0 915
ENST00000427534 SPG11-004 protein_coding Homo_sapiens 0 226
ENST00000535302 SPG11-002 protein_coding Homo_sapiens 0 915
ENST00000558138 SPG11-019 protein_coding Homo_sapiens 0 588
ENST00000559347 SPG11-027 processed_transcript Homo_sapiens 0 392
ENST00000559511 SPG11-007 protein_coding Homo_sapiens 0 915
ENST00000560299 SPG11-020 retained_intron Homo_sapiens 0 357
ENST00000561268 SPG11-018 retained_intron Homo_sapiens 0 224

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