C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: spastic paraplegia 11 (autosomal recessive)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000561268 SPG11-018 ENSG00000104133 9606 - 15:44567338-44573683 retained_intron

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000686 CIL_000686_0001 CGP 15:44427234-44563029
CIL_0004DI CIL_0004DI_0001 CGP 15:44537057-44663678
CIL_0004DJ CIL_0004DJ_0001 CGP 15:44562696-44711316

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000036450 Spg11-001 protein_coding Mus_musculus 0 315
ENSMUST00000028668 Eif3j1-001 protein_coding Mus_musculus 0 231
ENSMUST00000180600 Gm3650-001 unprocessed_pseudogene Mus_musculus 0 224

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