C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 6614
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000181628 Gm6614-002 ENSMUSG00000079263 10090 - 6:141971845-142011414 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainLiverOvaryTestisENSMUST00000181628
Transcript ID Brain Liver Ovary Testis
ENSMUST00000181628 0.052±0.00 0.013±0.01 0.069±0.00 0.028±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005215 IEA transporter activity
GO:0005575 ND cellular_component
GO:0006810 IEA transport
GO:0016020 IEA membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000307378 SLCO1A2-001 protein_coding Homo_sapiens 0 1061
ENST00000421287 SLCO1A2-013 protein_coding Homo_sapiens 6e-34 148
ENST00000421294 SLCO1A2-011 protein_coding Homo_sapiens 0 241
ENST00000422327 SLCO1A2-012 protein_coding Homo_sapiens 0 324
ENST00000435179 SLCO1A2-007 protein_coding Homo_sapiens 0 226
ENST00000445053 SLCO1A2-005 protein_coding Homo_sapiens 6e-38 161
ENST00000450590 SLCO1A2-010 protein_coding Homo_sapiens 0 231
ENST00000453443 SLCO1A2-009 protein_coding Homo_sapiens 0 309
ENST00000463718 SLCO1A2-003 retained_intron Homo_sapiens 0 915
ENST00000473830 SLCO1A2-006 processed_transcript Homo_sapiens 9.99995e-41 171
ENST00000480394 SLCO1A2-004 retained_intron Homo_sapiens 0 763
ENST00000544020 SLCO1A2-016 nonsense_mediated_decay Homo_sapiens 4e-30 137
ENST00000544290 SLCO1A2-017 nonsense_mediated_decay Homo_sapiens 4.00001e-40 171

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