C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: RNA binding motif protein 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000181986 Rbm6-003 ENSMUSG00000032582 10090 - 9:107773567-107872763 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderLiverMuscleOvaryENSMUST00000181986
Transcript ID Bladder Liver Muscle Ovary
ENSMUST00000181986 5.068±0.00 2.016±0.00 1.656±0.26 4.479±3.01

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 IDA nucleus

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000266022 RBM6-001 protein_coding Homo_sapiens 0 2135
ENST00000419610 RBM6-002 nonsense_mediated_decay Homo_sapiens 0 2311
ENST00000421682 RBM6-019 protein_coding Homo_sapiens 0 429
ENST00000422955 RBM6-007 protein_coding Homo_sapiens 0 2135
ENST00000434592 RBM6-008 nonsense_mediated_decay Homo_sapiens 0 1640
ENST00000438912 RBM6-017 protein_coding Homo_sapiens 0 549
ENST00000441115 RBM6-004 processed_transcript Homo_sapiens 0 1216
ENST00000442092 RBM6-006 protein_coding Homo_sapiens 0 2135
ENST00000443081 RBM6-009 protein_coding Homo_sapiens 0 2135
ENST00000446471 RBM6-014 protein_coding Homo_sapiens 0 374
ENST00000454079 RBM6-003 nonsense_mediated_decay Homo_sapiens 0 1203
ENST00000478026 RBM6-020 retained_intron Homo_sapiens 0 281
ENST00000483350 RBM6-016 retained_intron Homo_sapiens 0 455

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