C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RNA binding motif protein 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000182304 Rbm5-011 ENSMUSG00000032580 10090 - 9:107754123-107770495 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

No expression data.

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0008270 IEA zinc ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000155483 rbm5-002 protein_coding Danio_rerio 2e-38 163
ENSDART00000114198 rbm5-201 protein_coding Danio_rerio 5e-20 102
ENSDART00000156839 rbm5-001 retained_intron Danio_rerio 5e-20 102
ENST00000347869 RBM5-001 protein_coding Homo_sapiens 0 1225
ENST00000395174 RBM5-014 nonsense_mediated_decay Homo_sapiens 0 453
ENST00000404526 RBM5-012 protein_coding Homo_sapiens 0 409
ENST00000417905 RBM5-009 protein_coding Homo_sapiens 0 566
ENST00000433556 RBM5-013 retained_intron Homo_sapiens 0 409
ENST00000434592 RBM6-008 nonsense_mediated_decay Homo_sapiens 0 630
ENST00000437500 RBM5-008 protein_coding Homo_sapiens 0 490
ENST00000438369 RBM5-011 nonsense_mediated_decay Homo_sapiens 0 307
ENST00000441305 RBM5-007 protein_coding Homo_sapiens 0 647
ENST00000462025 RBM5-015 retained_intron Homo_sapiens 0 193
ENST00000464087 RBM5-004 retained_intron Homo_sapiens 0 778
ENST00000469838 RBM5-003 protein_coding Homo_sapiens 0 647
ENST00000471995 RBM5-016 retained_intron Homo_sapiens 0 193
ENST00000474818 RBM5-018 retained_intron Homo_sapiens 0 193
ENST00000492472 RBM5-010 retained_intron Homo_sapiens 0 523
ENST00000496179 RBM5-005 retained_intron Homo_sapiens 0 453

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