C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RNA binding motif protein 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000155483 rbm5-002 ENSDARG00000078781 7955 + 6:53229217-53237972 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverENSDART00000155483
Transcript ID Brain Heart Kidney Liver
ENSDART00000155483 26.890±2.11 11.154±0.69 20.614±0.00 0.958±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0008270 IEA zinc ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000035199 Rbm5-004 protein_coding Mus_musculus 9.99995e-41 172
ENSMUST00000182007 Rbm5-008 retained_intron Mus_musculus 4e-34 150
ENSMUST00000182304 Rbm5-011 protein_coding Mus_musculus 2e-38 163
ENSMUST00000182421 Rbm5-003 nonsense_mediated_decay Mus_musculus 8.00001e-41 172
ENSMUST00000182659 Rbm5-001 protein_coding Mus_musculus 2e-40 172
ENSMUST00000183307 Rbm5-006 retained_intron Mus_musculus 4e-19 102
ENST00000347869 RBM5-001 protein_coding Homo_sapiens 0 202
ENST00000404526 RBM5-012 protein_coding Homo_sapiens 1e-30 137
ENST00000464087 RBM5-004 retained_intron Homo_sapiens 6.00036e-42 178
ENST00000469838 RBM5-003 protein_coding Homo_sapiens 2e-19 102

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