C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: NLR family, CARD domain containing 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000182409 Nlrc5-004 ENSMUSG00000074151 10090 + 8:94476126-94506778 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalKidneyLiverLungMuscleOvaryENSMUST00000182409
Transcript ID Adrenal Kidney Liver Lung Muscle Ovary
ENSMUST00000182409 0.907±0.00 0.331±0.00 0.762±0.00 1.107±0.00 0.364±0.00 0.711±0.23

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00051Y CIL_00051Y_0003 CGP 8:94472763-94570529

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000262510 NLRC5-001 protein_coding Homo_sapiens 0 1480
ENST00000436936 NLRC5-201 protein_coding Homo_sapiens 0 1480
ENST00000536231 NLRC5-020 retained_intron Homo_sapiens 0 357
ENST00000538110 NLRC5-006 protein_coding Homo_sapiens 0 924
ENST00000538805 NLRC5-004 protein_coding Homo_sapiens 0 1489
ENST00000539144 NLRC5-013 protein_coding Homo_sapiens 0 1243
ENST00000539881 NLRC5-003 nonsense_mediated_decay Homo_sapiens 0 721
ENST00000543030 NLRC5-008 protein_coding Homo_sapiens 0 237
ENST00000545081 NLRC5-007 nonsense_mediated_decay Homo_sapiens 0 1411

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