C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: piccolo (presynaptic cytomatrix protein)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000182426 Pclo-003 ENSMUSG00000061601 10090 + 5:14514993-14860184 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLungMuscleOvaryPlacentaTestisENSMUST00000182426
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Lung Muscle Ovary Placenta Testis
ENSMUST00000182426 0.032±0.00 0.038±0.00 1.658±0.00 0.036±0.02 0.033±0.00 0.024±0.00 0.121±0.03 0.071±0.03 0.006±0.00 0.062±0.01 0.009±0.00 0.035±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003CW CIL_0003CW_0002 CGP 5:14025276-14860184

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000333891 PCLO-001 protein_coding Homo_sapiens 0 7723
ENST00000413807 PCLO-008 nonsense_mediated_decay Homo_sapiens 0 645
ENST00000423517 PCLO-011 protein_coding Homo_sapiens 0 6931
ENST00000426442 PCLO-004 processed_transcript Homo_sapiens 0 1528
ENST00000432078 PCLO-010 processed_transcript Homo_sapiens 0 235
ENST00000437081 PCLO-003 protein_coding Homo_sapiens 0 4211
ENST00000456006 PCLO-007 nonsense_mediated_decay Homo_sapiens 0 305
ENST00000461143 PCLO-009 processed_transcript Homo_sapiens 0 322
ENST00000618073 PCLO-201 protein_coding Homo_sapiens 0 1528

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