C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 5864
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000182436 Gm5864-001 ENSMUSG00000097978 10090 + 5:32420003-32420972 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000182436
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000182436 1.501±0.42 0.159±0.06 0.225±0.06 0.049±0.00 0.690±0.40 1.315±0.47 0.543±0.14 0.061±0.02 0.239±0.11 0.938±0.25 0.205±0.14 2.022±1.25 0.345±0.20 0.107±0.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00013Q CIL_00013Q_0002 CGP 5:32232708-32517433

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000329399 PDLIM1-001 protein_coding Homo_sapiens 0 1003
ENST00000477757 PDLIM1-002 processed_transcript Homo_sapiens 0 697
ENST00000490391 PDLIM1-005 processed_transcript Homo_sapiens 0 213
ENST00000492511 PDLIM1-004 processed_transcript Homo_sapiens 0 361
ENST00000504327 PDLIM1P4-001 processed_pseudogene Homo_sapiens 0 435

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