C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | PDZ and LIM domain 1 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000477757  |
PDLIM1-002 |
ENSG00000107438 |
9606 | - |
10:95238010-95291012  |
processed_transcript |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_00095J | CIL_00095J_0001 | VISTA | 10:95113366-95716533 |
| CIL_0007T2 | CIL_0007T2_0001 | VISTA | 10:95207959-95809585 |
| CIL_00067J | CIL_00067J_0001 | CGP | 10:95237572-95561414 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| No GO terms available. | ||
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000068439
|
Pdlim1-001 | protein_coding | Mus_musculus | 0 | 702 |
|
ENSMUST00000182436
|
Gm5864-001 | processed_pseudogene | Mus_musculus | 0 | 697 |
|
ENSMUST00000120359
|
Gm12104-001 | processed_pseudogene | Mus_musculus | 0 | 566 |
|
ENSMUST00000182813
|
Pdlim1-004 | retained_intron | Mus_musculus | 0 | 418 |
|
ENSMUST00000182540
|
Pdlim1-005 | retained_intron | Mus_musculus | 0 | 289 |
|
ENSMUST00000182636
|
Pdlim1-002 | retained_intron | Mus_musculus | 2e-29 | 134 |
|
ENSMUST00000182432
|
Pdlim1-003 | protein_coding | Mus_musculus | 2e-29 | 134 |
