C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 7656
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000182468 Gm7656-001 ENSMUSG00000097991 10090 + 7:70490848-70491851 processed_pseudogene

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainHeartLiverLungOvaryPlacentaENSMUST00000182468
Transcript ID Adipose Bladder Brain Heart Liver Lung Ovary Placenta
ENSMUST00000182468 0.069±0.03 0.032±0.02 0.236±0.00 0.062±0.00 0.022±0.02 0.082±0.04 0.232±0.13 0.104±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007O7 CIL_0007O7_0003 UCNEbase 7:69097096-72048391

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000229239 GAPDH-001 protein_coding Homo_sapiens 0 647
ENST00000328713 GAPDHP24-001 processed_pseudogene Homo_sapiens 0 364
ENST00000396856 GAPDH-004 protein_coding Homo_sapiens 0 501
ENST00000396858 GAPDH-008 protein_coding Homo_sapiens 0 638
ENST00000396859 GAPDH-003 protein_coding Homo_sapiens 0 647
ENST00000396861 GAPDH-002 protein_coding Homo_sapiens 0 647
ENST00000405405 GAPDHP63-001 processed_pseudogene Homo_sapiens 0 571
ENST00000423411 GAPDHP73-001 processed_pseudogene Homo_sapiens 0 538
ENST00000425487 GAPDHP65-001 processed_pseudogene Homo_sapiens 0 580
ENST00000426454 GAPDHP51-001 processed_pseudogene Homo_sapiens 0 399
ENST00000434621 GAPDHP68-001 processed_pseudogene Homo_sapiens 0 455
ENST00000444107 GAPDHP20-001 processed_pseudogene Homo_sapiens 0 366
ENST00000455134 GAPDHP28-001 processed_pseudogene Homo_sapiens 0 385
ENST00000466525 GAPDH-007 retained_intron Homo_sapiens 0 307
ENST00000466588 GAPDH-005 retained_intron Homo_sapiens 0 501
ENST00000474249 GAPDH-006 retained_intron Homo_sapiens 0 501
ENST00000505218 GAPDHP40-001 processed_pseudogene Homo_sapiens 0 446
ENST00000508195 RP11-616K22.1-001 processed_pseudogene Homo_sapiens 0 320
ENST00000513513 GAPDHP44-001 processed_pseudogene Homo_sapiens 0 464
ENST00000619601 GAPDH-201 protein_coding Homo_sapiens 0 584

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