C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000182731 Ppfia1-007 ENSMUSG00000037519 10090 - 7:144519258-144552362 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainOvaryPlacentaENSMUST00000182731
Transcript ID Brain Ovary Placenta
ENSMUST00000182731 27.158±0.00 71.125±0.00 125.273±16.44

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0007160 IEA cell-matrix adhesion
GO:0007165 IEA signal transduction
GO:0048786 IEA presynaptic active zone
GO:0051497 IDA negative regulation of stress fiber assembly

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000253925 PPFIA1-001 protein_coding Homo_sapiens 0 407
ENST00000389547 PPFIA1-002 protein_coding Homo_sapiens 0 407
ENST00000532504 PPFIA1-003 nonsense_mediated_decay Homo_sapiens 0 407

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