C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: recombining binding protein suppressor of hairless (Drosophila), related sequence 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000182751 Rbpsuh-rs3-001 ENSMUSG00000079575 10090 - 6:46529354-46530794 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000182751
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000182751 1.056±0.45 0.083±0.00 0.301±0.15 1.571±0.84 0.945±0.44 0.391±0.00 0.665±0.00 0.298±0.07 0.257±0.25 0.949±0.00 0.070±0.00 1.554±1.15 1.292±1.24 0.481±0.24

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004XR CIL_0004XR_0002 CGP 6:43345001-47301369

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000342295 RBPJ-201 protein_coding Homo_sapiens 0 1930
ENST00000342320 RBPJ-003 protein_coding Homo_sapiens 0 1930
ENST00000345843 RBPJ-001 protein_coding Homo_sapiens 0 1930
ENST00000348160 RBPJ-030 protein_coding Homo_sapiens 0 1930
ENST00000355476 RBPJ-202 protein_coding Homo_sapiens 0 1930
ENST00000361572 RBPJ-002 protein_coding Homo_sapiens 0 1930
ENST00000411556 RBPJP6-001 processed_pseudogene Homo_sapiens 0 1495
ENST00000442803 RBPJP7-001 processed_pseudogene Homo_sapiens 0 1507
ENST00000449433 RBPJP5-001 processed_pseudogene Homo_sapiens 0 1513
ENST00000504423 RBPJ-026 protein_coding Homo_sapiens 0 392
ENST00000504907 RBPJ-010 protein_coding Homo_sapiens 0 1399
ENST00000504938 RBPJ-020 protein_coding Homo_sapiens 0 697
ENST00000505727 RBPJ-028 retained_intron Homo_sapiens 0 538
ENST00000505958 RBPJ-006 protein_coding Homo_sapiens 4e-21 106
ENST00000506903 RBPJ-025 retained_intron Homo_sapiens 0 514
ENST00000506956 RBPJ-011 protein_coding Homo_sapiens 0 396
ENST00000507561 RBPJ-007 protein_coding Homo_sapiens 0 1930
ENST00000507574 RBPJ-015 protein_coding Homo_sapiens 0 743
ENST00000509158 RBPJ-013 protein_coding Homo_sapiens 0 196
ENST00000510725 RBPJ-027 retained_intron Homo_sapiens 0 425
ENST00000510778 RBPJ-029 protein_coding Homo_sapiens 0 798
ENST00000511401 RBPJ-022 processed_transcript Homo_sapiens 0 202
ENST00000511451 RBPJ-021 retained_intron Homo_sapiens 0 697
ENST00000511546 RBPJ-018 protein_coding Homo_sapiens 0 440
ENST00000512351 RBPJ-004 protein_coding Homo_sapiens 0 381
ENST00000512671 RBPJ-005 protein_coding Homo_sapiens 0 697
ENST00000513182 RBPJ-024 nonsense_mediated_decay Homo_sapiens 0 202
ENST00000514380 RBPJ-009 retained_intron Homo_sapiens 0 1400
ENST00000514675 RBPJ-016 protein_coding Homo_sapiens 0 453
ENST00000514730 RBPJ-014 protein_coding Homo_sapiens 0 468
ENST00000514807 RBPJ-012 protein_coding Homo_sapiens 0 193
ENST00000515023 RBPJ-023 processed_transcript Homo_sapiens 0 202
ENST00000515573 RBPJ-017 protein_coding Homo_sapiens 0 852
ENST00000618187 RP11-120E5.1-001 processed_pseudogene Homo_sapiens 0 1511

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