C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: natural killer cell triggering receptor
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000468735 NKTR-002 ENSG00000114857 9606 + 3:42600655-42638226 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastKidneyLiverLungOvaryENST00000468735
Transcript ID Bladder Brain Breast Kidney Liver Lung Ovary
ENST00000468735 2.076±0.00 2.524±0.00 5.429±0.00 1.959±0.00 4.094±0.00 8.960±0.00 4.320±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000480 CIL_000480_0001 CGP 3:42489299-42601080
CIL_00047Z CIL_00047Z_0001 CGP 3:42547969-42601080
CIL_000488 CIL_000488_0001 CGP 3:42581840-42648741
CIL_000487 CIL_000487_0001 CGP 3:42600614-42665854

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000035112 Nktr-001 protein_coding Mus_musculus 0 1903
ENSMUST00000182225 Nktr-006 protein_coding Mus_musculus 0 1598
ENSMUST00000182179 Nktr-003 nonsense_mediated_decay Mus_musculus 0 1005
ENSMUST00000182904 Nktr-005 retained_intron Mus_musculus 0 590
ENSMUST00000182086 Nktr-012 retained_intron Mus_musculus 0 449
ENSMUST00000183070 Nktr-002 nonsense_mediated_decay Mus_musculus 0 405
ENSMUST00000182337 Nktr-007 protein_coding Mus_musculus 0 313
ENSMUST00000182763 Nktr-009 nonsense_mediated_decay Mus_musculus 0 302
ENSMUST00000183311 Nktr-004 retained_intron Mus_musculus 0 237
ENSMUST00000182311 Nktr-010 protein_coding Mus_musculus 0 219
ENSMUST00000182395 Nktr-011 retained_intron Mus_musculus 8e-37 161
ENSMUST00000179332 5730455P16Rik-201 protein_coding Mus_musculus 0.000000001 71
ENSMUST00000103225 5730455P16Rik-001 protein_coding Mus_musculus 0.000000001 71
ENSMUST00000034431 Tmem170-201 protein_coding Mus_musculus 0.00000007 66
ENSMUST00000024742 Nfkbie-201 protein_coding Mus_musculus 0.0000009 62

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