C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: natural killer cell triggering receptor
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000466553 NKTR-016 ENSG00000114857 9606 + 3:42621005-42631316 retained_intron

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000480 CIL_000480_0001 CGP 3:42489299-42601080
CIL_00047Z CIL_00047Z_0001 CGP 3:42547969-42601080
CIL_000488 CIL_000488_0001 CGP 3:42581840-42648741
CIL_000487 CIL_000487_0001 CGP 3:42600614-42665854

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000182904 Nktr-005 retained_intron Mus_musculus 0 451
ENSMUST00000182086 Nktr-012 retained_intron Mus_musculus 0 449
ENSMUST00000182179 Nktr-003 nonsense_mediated_decay Mus_musculus 0 422
ENSMUST00000182763 Nktr-009 nonsense_mediated_decay Mus_musculus 0 422
ENSMUST00000182225 Nktr-006 protein_coding Mus_musculus 0 219
ENSMUST00000035112 Nktr-001 protein_coding Mus_musculus 0 219
ENSMUST00000183070 Nktr-002 nonsense_mediated_decay Mus_musculus 0 219
ENSMUST00000182311 Nktr-010 protein_coding Mus_musculus 6e-39 165
ENSMUST00000182395 Nktr-011 retained_intron Mus_musculus 7e-38 161
ENSMUST00000182337 Nktr-007 protein_coding Mus_musculus 0.00000000001 75

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