C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: piccolo (presynaptic cytomatrix protein)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000182915 Pclo-004 ENSMUSG00000061601 10090 + 5:14680863-14796004 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000182915
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000182915 0.114±0.04 0.323±0.11 0.465±0.06 6.305±3.96 0.081±0.01 0.044±0.02 0.036±0.02 0.580±0.03 0.016±0.01 0.140±0.06 0.018±0.01 0.243±0.08 0.013±0.01 0.054±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003CW CIL_0003CW_0002 CGP 5:14025276-14860184

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000333891 PCLO-001 protein_coding Homo_sapiens 0 2601
ENST00000413807 PCLO-008 nonsense_mediated_decay Homo_sapiens 0 645
ENST00000423517 PCLO-011 protein_coding Homo_sapiens 0 2601
ENST00000426442 PCLO-004 processed_transcript Homo_sapiens 0 1736
ENST00000432078 PCLO-010 processed_transcript Homo_sapiens 0 311
ENST00000437081 PCLO-003 protein_coding Homo_sapiens 0 2601
ENST00000456006 PCLO-007 nonsense_mediated_decay Homo_sapiens 0 305
ENST00000618073 PCLO-201 protein_coding Homo_sapiens 0 1736

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