C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene, 27026
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000183003 Gm27026-001 ENSMUSG00000098000 10090 - 18:52472848-52473739 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000183003
Transcript ID Adipose Adrenal Bladder Brain Breast Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000183003 0.113±0.07 0.103±0.00 0.072±0.00 0.059±0.00 0.187±0.03 0.104±0.00 0.092±0.04 0.080±0.04 0.130±0.05 0.222±0.12 0.071±0.00 0.149±0.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004B3 CIL_0004B3_0002 CGP 18:52331536-52490738
CIL_0004B2 CIL_0004B2_0002 CGP 18:52465693-52529867

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000425487 GAPDHP65-001 processed_pseudogene Homo_sapiens 1e-22 111
ENST00000425504 GAPDHP69-001 processed_pseudogene Homo_sapiens 2e-20 104
ENST00000447061 GAPDHP25-001 processed_pseudogene Homo_sapiens 1e-22 111
ENST00000503632 GAPDHP38-001 processed_pseudogene Homo_sapiens 5e-26 122
ENST00000507324 GAPDHP61-001 processed_pseudogene Homo_sapiens 2e-24 117
ENST00000512278 GAPDHP76-001 unprocessed_pseudogene Homo_sapiens 2e-19 100
ENST00000513846 GAPDHP60-001 processed_pseudogene Homo_sapiens 5e-21 106

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