C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: glyceraldehyde 3 phosphate dehydrogenase pseudogene 25
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000447061 GAPDHP25-001 ENSG00000213594 9606 + 2:38285410-38286410 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastHeartKidneyMuscleTestisENST00000447061
Transcript ID Adipose Brain Breast Heart Kidney Muscle Testis
ENST00000447061 0.016±0.00 0.037±0.00 0.017±0.00 0.029±0.00 0.050±0.00 0.221±0.00 0.030±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002IO CIL_0002IO_0001 CGP 2:38066973-38377285

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000119851 Gm14111-001 processed_pseudogene Mus_musculus 0 861
ENSMUST00000182691 Gm7286-001 processed_pseudogene Mus_musculus 0 848
ENSMUST00000120200 Gm11557-001 processed_pseudogene Mus_musculus 0 843
ENSMUST00000183250 Gm8756-001 processed_pseudogene Mus_musculus 0 817
ENSMUST00000118417 Gm14130-001 processed_pseudogene Mus_musculus 0 802
ENSMUST00000117318 Gm11453-001 processed_pseudogene Mus_musculus 0 769
ENSMUST00000120913 Gm11658-001 processed_pseudogene Mus_musculus 0 737
ENSMUST00000182707 Gm9061-001 processed_pseudogene Mus_musculus 0 725
ENSMUST00000120199 Gm12969-001 processed_pseudogene Mus_musculus 0 723
ENSMUST00000182638 Gm4518-001 processed_pseudogene Mus_musculus 0 708
ENSMUST00000182941 Gm7583-001 processed_pseudogene Mus_musculus 0 702
ENSMUST00000180794 Gm5976-001 processed_pseudogene Mus_musculus 0 695
ENSMUST00000117317 Gm5187-001 processed_pseudogene Mus_musculus 0 693
ENSMUST00000121923 Gm4908-001 processed_pseudogene Mus_musculus 0 691
ENSMUST00000118675 Gm12684-001 processed_pseudogene Mus_musculus 0 691
ENSMUST00000182678 Gm7191-001 processed_pseudogene Mus_musculus 0 688
ENSMUST00000182201 Gm5300-001 processed_pseudogene Mus_musculus 0 684
ENSMUST00000182240 Gm8907-001 processed_pseudogene Mus_musculus 0 684
ENSMUST00000118177 Gm15294-001 translated_processed_pseudogene Mus_musculus 0 673
ENSMUST00000182893 Gm5313-001 processed_pseudogene Mus_musculus 0 664
ENSMUST00000122032 Gm7150-001 processed_pseudogene Mus_musculus 0 656
ENSMUST00000182235 Gm7745-001 processed_pseudogene Mus_musculus 0 654
ENSMUST00000182628 Gm26937-001 processed_pseudogene Mus_musculus 0 652
ENSMUST00000181445 Gm7741-001 processed_pseudogene Mus_musculus 0 621
ENSMUST00000117854 Gm13296-001 processed_pseudogene Mus_musculus 0 617
ENSMUST00000183257 Gm7693-001 processed_pseudogene Mus_musculus 0 616
ENSMUST00000184486 Gm12117-001 translated_processed_pseudogene Mus_musculus 0 599
ENSMUST00000182857 Gm18822-001 processed_pseudogene Mus_musculus 0 588
ENSMUST00000182482 Gm9022-001 transcribed_processed_pseudogene Mus_musculus 0 566
ENSMUST00000182057 Gm5350-001 processed_pseudogene Mus_musculus 0 555
ENSMUST00000182082 Gm8957-001 processed_pseudogene Mus_musculus 0 547
ENSMUST00000182302 Gm7132-001 processed_pseudogene Mus_musculus 0 503
ENSMUST00000117538 Gm11996-001 processed_pseudogene Mus_musculus 0 492
ENSMUST00000182528 Gm8614-001 processed_pseudogene Mus_musculus 0 444
ENSMUST00000182990 Gm26970-001 processed_pseudogene Mus_musculus 0 372
ENSMUST00000187802 RP24-369P14.2-001 processed_pseudogene Mus_musculus 0 326
ENSMUST00000182438 Gm27039-001 processed_pseudogene Mus_musculus 0 309
ENSMUST00000182807 Gm27043-001 processed_pseudogene Mus_musculus 0 287
ENSMUST00000161466 Gm16297-001 processed_pseudogene Mus_musculus 0 283
ENSMUST00000159905 Gm16296-001 processed_pseudogene Mus_musculus 0 244
ENSMUST00000117238 Gm13761-001 processed_pseudogene Mus_musculus 2.99878e-43 180
ENSMUST00000186767 RP24-468E2.1-001 unprocessed_pseudogene Mus_musculus 1e-22 111
ENSMUST00000183003 Gm27026-001 processed_pseudogene Mus_musculus 1e-22 111

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