C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: bridging integrator 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000267012 BIN2-201 ENSG00000110934 9606 - 12:51281039-51324154 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastHeartKidneyLiverLungOvaryPlacentaTestisENST00000267012
Transcript ID Adipose Adrenal Brain Breast Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000267012 2.740±0.00 12.642±0.00 0.829±0.34 0.785±0.00 0.437±0.37 0.252±0.00 1.168±0.00 6.505±0.00 0.843±0.55 8.917±2.03 4.139±0.14

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003K2 CIL_0003K2_0001 CGP 12:51244558-51324668
CIL_0006JT CIL_0006JT_0001 CGP 12:51281038-51346679

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001891 IDA phagocytic cup
GO:0002102 IDA podosome
GO:0005515 IPI:IEA protein binding
GO:0005543 IDA phospholipid binding
GO:0005737 IEA cytoplasm
GO:0006911 IMP phagocytosis, engulfment
GO:0030054 IEA cell junction
GO:0042995 IEA cell projection
GO:0060326 IMP cell chemotaxis
GO:0071800 IMP podosome assembly
GO:0097320 IDA membrane tubulation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000183211 Bin2-001 protein_coding Mus_musculus 0 1048
ENSMUST00000182814 Bin2-004 protein_coding Mus_musculus 0 813
ENSMUST00000182574 Bin2-007 protein_coding Mus_musculus 0 549
ENSMUST00000182775 Bin2-005 protein_coding Mus_musculus 0 453

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