C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 9621
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000183322 Gm9621-001 ENSMUSG00000098171 10090 - 9:93391368-93392370 processed_pseudogene

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartENSMUST00000183322
Transcript ID Brain Heart
ENSMUST00000183322 0.015±0.00 0.031±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005X5 CIL_0005X5_0002 CGP 9:92542223-94538081

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000229239 GAPDH-001 protein_coding Homo_sapiens 0 758
ENST00000396856 GAPDH-004 protein_coding Homo_sapiens 0 603
ENST00000396858 GAPDH-008 protein_coding Homo_sapiens 0 752
ENST00000396859 GAPDH-003 protein_coding Homo_sapiens 0 758
ENST00000396861 GAPDH-002 protein_coding Homo_sapiens 0 758
ENST00000405405 GAPDHP63-001 processed_pseudogene Homo_sapiens 0 651
ENST00000434621 GAPDHP68-001 processed_pseudogene Homo_sapiens 0 627
ENST00000444107 GAPDHP20-001 processed_pseudogene Homo_sapiens 0 459
ENST00000447427 GAPDHP27-001 processed_pseudogene Homo_sapiens 0 324
ENST00000466525 GAPDH-007 retained_intron Homo_sapiens 0 405
ENST00000466588 GAPDH-005 retained_intron Homo_sapiens 0 603
ENST00000474249 GAPDH-006 retained_intron Homo_sapiens 0 603
ENST00000513513 GAPDHP44-001 processed_pseudogene Homo_sapiens 0 575
ENST00000619601 GAPDH-201 protein_coding Homo_sapiens 0 689

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