C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: nucleobindin 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000183335 Nucb2-004 ENSMUSG00000030659 10090 + 7:116528812-116536033 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonENSMUST00000183335
Transcript ID Colon
ENSMUST00000183335 0.425±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000836 CIL_000836_0002 VISTA 7:115904293-116509702
CIL_0003ZV CIL_0003ZV_0002 CGP 7:116337276-116540554
CIL_0008RM CIL_0008RM_0002 VISTA 7:116387002-116987715

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000323688 NUCB2-004 protein_coding Homo_sapiens 3e-36 158
ENST00000458064 NUCB2-201 protein_coding Homo_sapiens 6e-36 156
ENST00000527580 NUCB2-014 protein_coding Homo_sapiens 3e-36 156
ENST00000529010 NUCB2-005 protein_coding Homo_sapiens 3e-36 158
ENST00000531242 NUCB2-013 retained_intron Homo_sapiens 1e-39 167
ENST00000533773 NUCB2-020 nonsense_mediated_decay Homo_sapiens 2e-36 158
ENST00000622082 NUCB2-202 protein_coding Homo_sapiens 2e-36 158

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