C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted pseudogene 5177
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000183337 Gm5177-002 ENSMUSG00000098065 10090 + 10:10605945-10616313 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastHeartKidneyOvaryPlacentaTestisENSMUST00000183337
Transcript ID Adipose Brain Breast Heart Kidney Ovary Placenta Testis
ENSMUST00000183337 0.008±0.00 0.003±0.00 0.032±0.00 0.013±0.01 0.007±0.00 0.052±0.03 0.004±0.00 0.032±0.02

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000229239 GAPDH-001 protein_coding Homo_sapiens 0 990
ENST00000396856 GAPDH-004 protein_coding Homo_sapiens 0 767
ENST00000396858 GAPDH-008 protein_coding Homo_sapiens 0 963
ENST00000396859 GAPDH-003 protein_coding Homo_sapiens 0 974
ENST00000396861 GAPDH-002 protein_coding Homo_sapiens 0 974
ENST00000402643 GAPDHP72-001 processed_pseudogene Homo_sapiens 0 754
ENST00000423411 GAPDHP73-001 processed_pseudogene Homo_sapiens 0 641
ENST00000424043 GAPDHP46-001 processed_pseudogene Homo_sapiens 0 592
ENST00000429913 GAPDHP29-001 processed_pseudogene Homo_sapiens 0 464
ENST00000432206 GAPDHP2-001 processed_pseudogene Homo_sapiens 0 634
ENST00000436626 GAPDHP48-001 processed_pseudogene Homo_sapiens 0 470
ENST00000436818 GAPDHP26-001 processed_pseudogene Homo_sapiens 0 503
ENST00000442317 GAPDHP37-001 processed_pseudogene Homo_sapiens 0 468
ENST00000444107 GAPDHP20-001 processed_pseudogene Homo_sapiens 0 525
ENST00000466525 GAPDH-007 retained_intron Homo_sapiens 0 512
ENST00000466588 GAPDH-005 retained_intron Homo_sapiens 0 767
ENST00000474249 GAPDH-006 retained_intron Homo_sapiens 0 767
ENST00000492719 GAPDH-011 retained_intron Homo_sapiens 0 647
ENST00000507324 GAPDHP61-001 processed_pseudogene Homo_sapiens 0 822
ENST00000509132 GAPDHP66-001 processed_pseudogene Homo_sapiens 0 446
ENST00000513953 RP11-44N17.1-001 processed_pseudogene Homo_sapiens 0 442
ENST00000613707 RP11-343D24.1-001 processed_pseudogene Homo_sapiens 0 381
ENST00000619601 GAPDH-201 protein_coding Homo_sapiens 0 881

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