C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger protein 280D
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000183468 Zfp280d-019 ENSMUSG00000038535 10090 + 9:72360202-72363627 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainLiverMuscleOvaryPlacentaENSMUST00000183468
Transcript ID Bladder Brain Liver Muscle Ovary Placenta
ENSMUST00000183468 4.530±0.54 9.606±0.00 2.325±1.01 1.189±0.16 4.924±0.00 2.880±0.47

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007TG CIL_0007TG_0002 VISTA 9:71674986-72275900
CIL_0008VA CIL_0008VA_0002 VISTA 9:71675967-72276730
CIL_0004OY CIL_0004OY_0002 CGP 9:71842688-72363777

Gene Ontology

GO IDEvidence TypeGO Description
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000267807 ZNF280D-003 protein_coding Homo_sapiens 0 547
ENST00000558067 ZNF280D-006 nonsense_mediated_decay Homo_sapiens 0 547
ENST00000559237 ZNF280D-001 protein_coding Homo_sapiens 0 547

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