C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger protein 280D
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000267807 ZNF280D-003 ENSG00000137871 9606 - 15:56630327-56733589 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000267807
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000267807 1.232±0.00 1.257±0.00 1.629±0.00 2.527±0.63 2.935±0.55 2.486±0.56 2.024±0.65 2.720±0.27 4.968±3.55 3.535±0.60 0.660±0.00 3.259±1.35 0.887±0.20 2.547±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000098576 Zfp280d-011 protein_coding Mus_musculus 0 2638
ENSMUST00000184517 Zfp280d-003 protein_coding Mus_musculus 0 2516
ENSMUST00000184036 Zfp280d-001 protein_coding Mus_musculus 0 2508
ENSMUST00000183410 Zfp280d-020 protein_coding Mus_musculus 0 2446
ENSMUST00000184399 Zfp280d-002 nonsense_mediated_decay Mus_musculus 0 1943
ENSMUST00000184053 Zfp280d-010 nonsense_mediated_decay Mus_musculus 0 1858
ENSMUST00000183801 Zfp280d-021 nonsense_mediated_decay Mus_musculus 0 1709
ENSMUST00000184786 Zfp280d-006 nonsense_mediated_decay Mus_musculus 0 652
ENSMUST00000185020 Zfp280d-007 nonsense_mediated_decay Mus_musculus 0 651
ENSMUST00000184019 Zfp280d-013 protein_coding Mus_musculus 0 577
ENSMUST00000183468 Zfp280d-019 protein_coding Mus_musculus 0 547
ENSMUST00000184248 Zfp280d-018 retained_intron Mus_musculus 0 377
ENSMUST00000183459 Zfp280d-009 retained_intron Mus_musculus 0 279
ENSMUST00000184216 Zfp280d-014 protein_coding Mus_musculus 0 254
ENSMUST00000183545 Zfp280d-016 retained_intron Mus_musculus 1e-38 167
ENSMUST00000184639 Zfp280d-005 processed_transcript Mus_musculus 2e-17 95
ENSMUST00000183400 Zfp280d-012 retained_intron Mus_musculus 0 292

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