C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: histocompatibility 2, blastocyst
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000183999 H2-Bl-011 ENSMUSG00000073406 10090 - 17:36080189-36084223 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryENSMUST00000183999
Transcript ID Ovary
ENSMUST00000183999 0.185±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005737 IDA cytoplasm
GO:0005886 IDA plasma membrane
GO:0009986 IDA cell surface
GO:0016021 IDA integral component of membrane
GO:0042270 IDA protection from natural killer cell mediated cytotoxicity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000420110 HLA-L-001 transcribed_unprocessed_pseudogene Homo_sapiens 0.0000004 60
ENST00000460301 HLA-L-002 processed_transcript Homo_sapiens 0.000002 60
ENST00000463348 HLA-L-002 processed_transcript Homo_sapiens 0.000002 60
ENST00000470222 HLA-L-001 transcribed_unprocessed_pseudogene Homo_sapiens 0.0000004 60
ENST00000475416 HLA-L-001 transcribed_unprocessed_pseudogene Homo_sapiens 0.0000001 62
ENST00000475567 HLA-L-001 transcribed_unprocessed_pseudogene Homo_sapiens 0.0000004 60
ENST00000476982 HLA-L-002 processed_transcript Homo_sapiens 0.000002 60
ENST00000482052 HLA-L-003 processed_transcript Homo_sapiens 0.0000007 60
ENST00000482187 HLA-L-002 processed_transcript Homo_sapiens 0.000002 60
ENST00000482589 HLA-L-001 transcribed_unprocessed_pseudogene Homo_sapiens 0.0000004 60
ENST00000491405 HLA-L-002 processed_transcript Homo_sapiens 0.0000005 62
ENST00000492699 HLA-L-001 transcribed_unprocessed_pseudogene Homo_sapiens 0.0000004 60
ENST00000497494 HLA-L-002 processed_transcript Homo_sapiens 0.000002 60

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