C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | nuclear RNA export factor 1 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000184663  |
Nxf1-004 |
ENSMUSG00000010097 |
10090 | + |
19:8764934-8767396  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_00089X | CIL_00089X_0002 | VISTA | 19:8644197-9245760 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0003723 | IDA | RNA binding |
| GO:0003729 | IDA | mRNA binding |
| GO:0005487 | IDA | nucleocytoplasmic transporter activity |
| GO:0005515 | IPI | protein binding |
| GO:0005634 | IDA | nucleus |
| GO:0005643 | IDA | nuclear pore |
| GO:0006405 | IDA | RNA export from nucleus |
| GO:0016973 | IPI | poly(A)+ mRNA export from nucleus |
| GO:0042405 | IDA | nuclear inclusion body |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000294172
|
NXF1-201 | protein_coding | Homo_sapiens | 0 | 261 |
|
ENST00000530875
|
NXF1-003 | protein_coding | Homo_sapiens | 0 | 261 |
|
ENST00000531709
|
NXF1-006 | protein_coding | Homo_sapiens | 6e-36 | 158 |
|
ENST00000531872
|
NXF1-016 | retained_intron | Homo_sapiens | 5e-37 | 158 |
|
ENST00000532297
|
NXF1-001 | protein_coding | Homo_sapiens | 0 | 261 |
