C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: striatin, calmodulin binding protein 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000184708 Strn4-013 ENSMUSG00000030374 10090 + 7:16823071-16833975 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainOvaryPlacentaTestisENSMUST00000184708
Transcript ID Brain Ovary Placenta Testis
ENSMUST00000184708 124.050±0.00 50.023±0.00 41.068±2.21 22.874±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000263280 STRN4-001 protein_coding Homo_sapiens 0 832
ENST00000391910 STRN4-002 protein_coding Homo_sapiens 0 832
ENST00000435164 STRN4-003 nonsense_mediated_decay Homo_sapiens 0 665
ENST00000539396 STRN4-004 protein_coding Homo_sapiens 0 832
ENST00000593979 STRN4-008 protein_coding Homo_sapiens 0 363
ENST00000594287 STRN4-021 protein_coding Homo_sapiens 0 652
ENST00000594357 STRN4-018 processed_transcript Homo_sapiens 0 520
ENST00000594704 STRN4-010 nonsense_mediated_decay Homo_sapiens 0 377
ENST00000594847 STRN4-014 retained_intron Homo_sapiens 0 695
ENST00000595357 STRN4-005 retained_intron Homo_sapiens 0 558
ENST00000596012 STRN4-009 protein_coding Homo_sapiens 1.99965e-42 176
ENST00000597021 STRN4-013 protein_coding Homo_sapiens 0 259
ENST00000597063 STRN4-012 protein_coding Homo_sapiens 0 285
ENST00000599231 STRN4-016 retained_intron Homo_sapiens 0 512
ENST00000600358 STRN4-017 nonsense_mediated_decay Homo_sapiens 0 1482
ENST00000601631 STRN4-020 retained_intron Homo_sapiens 0 520
ENST00000602223 STRN4-019 processed_transcript Homo_sapiens 0 667

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