C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene, 18048
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000185066 Gm18048-001 ENSMUSG00000098506 10090 + 7:14304780-14307665 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonLiverMuscleOvaryPlacentaTestisENSMUST00000185066
Transcript ID Adipose Brain Breast Colon Liver Muscle Ovary Placenta Testis
ENSMUST00000185066 0.014±0.00 0.086±0.05 0.040±0.00 0.026±0.00 0.015±0.00 0.012±0.00 0.032±0.01 0.108±0.03 0.015±0.01

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000339089 PHF20-001 protein_coding Homo_sapiens 0 944
ENST00000374000 PHF20-004 protein_coding Homo_sapiens 0 944
ENST00000374012 PHF20-003 protein_coding Homo_sapiens 0 1591
ENST00000439301 PHF20-201 protein_coding Homo_sapiens 0 944
ENST00000449988 PHF20-012 protein_coding Homo_sapiens 0 508
ENST00000452270 PHF20-011 nonsense_mediated_decay Homo_sapiens 0 344
ENST00000461122 PHF20-005 processed_transcript Homo_sapiens 0 538
ENST00000461405 PHF20-010 retained_intron Homo_sapiens 2e-32 143
ENST00000480940 PHF20-009 processed_transcript Homo_sapiens 0 538
ENST00000481202 PHF20-006 processed_transcript Homo_sapiens 0 828
ENST00000485604 PHF20-014 retained_intron Homo_sapiens 0 268
ENST00000486408 PHF20-008 processed_transcript Homo_sapiens 0 809
ENST00000495338 PHF20-013 processed_transcript Homo_sapiens 3e-40 169
ENST00000496305 PHF20-007 processed_transcript Homo_sapiens 0 416

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