C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: PHD finger protein 20
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000481202 PHF20-006 ENSG00000025293 9606 + 20:35772026-35913316 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBreastHeartENST00000481202
Transcript ID Bladder Breast Heart
ENST00000481202 0.895±0.00 3.206±0.00 0.809±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000X2 CIL_0000X2_0001 CGP 20:35703609-35950381
CIL_00056T CIL_00056T_0001 CGP 20:35771974-35959472

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000152617 Phf20-004 processed_transcript Mus_musculus 0 1206
ENSMUST00000037401 Phf20-001 protein_coding Mus_musculus 0 1206
ENSMUST00000185066 Gm18048-001 processed_pseudogene Mus_musculus 0 828
ENSMUST00000131479 Phf20-006 processed_transcript Mus_musculus 0 566
ENSMUST00000145731 Phf20-010 protein_coding Mus_musculus 0 512
ENSMUST00000132129 Phf20-002 retained_intron Mus_musculus 0 472
ENSMUST00000147234 Phf20-011 processed_transcript Mus_musculus 0 327
ENSMUST00000135796 Phf20-003 retained_intron Mus_musculus 0 250
ENSMUST00000153822 Phf20-005 processed_transcript Mus_musculus 0 233

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