C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | PHD finger protein 20 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000374000  |
PHF20-004 |
ENSG00000025293 |
9606 | + |
20:35772026-35913335  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0000X2 | CIL_0000X2_0001 | CGP | 20:35703609-35950381 |
| CIL_00056T | CIL_00056T_0001 | CGP | 20:35771974-35959472 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0003677 | IEA | DNA binding |
| GO:0005634 | IDA | nucleus |
| GO:0031965 | IDA | nuclear membrane |
| GO:0046872 | IEA | metal ion binding |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000037401
|
Phf20-001 | protein_coding | Mus_musculus | 0 | 1892 |
|
ENSMUST00000152617
|
Phf20-004 | processed_transcript | Mus_musculus | 0 | 1714 |
|
ENSMUST00000185066
|
Gm18048-001 | processed_pseudogene | Mus_musculus | 0 | 944 |
|
ENSMUST00000131479
|
Phf20-006 | processed_transcript | Mus_musculus | 0 | 708 |
|
ENSMUST00000145731
|
Phf20-010 | protein_coding | Mus_musculus | 0 | 510 |
|
ENSMUST00000132129
|
Phf20-002 | retained_intron | Mus_musculus | 0 | 411 |
|
ENSMUST00000147234
|
Phf20-011 | processed_transcript | Mus_musculus | 0 | 327 |
|
ENSMUST00000153822
|
Phf20-005 | processed_transcript | Mus_musculus | 0 | 230 |
|
ENSMUST00000135796
|
Phf20-003 | retained_intron | Mus_musculus | 9.80909e-45 | 185 |
