C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: secretogranin II
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000185234 Scg2-002 ENSMUSG00000050711 10090 - 1:79434669-79440042 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000185234
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000185234 0.038±0.02 16.614±5.87 0.069±0.00 39.737±44.66 0.036±0.00 1.497±0.31 0.022±0.01 0.083±0.03 0.028±0.02 0.038±0.02 0.017±0.01 0.123±0.05 0.019±0.01 0.157±0.14

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004AL CIL_0004AL_0003 CGP 1:78816758-79440120
CIL_0004AM CIL_0004AM_0004 CGP 1:79434669-79671972

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000305409 SCG2-001 protein_coding Homo_sapiens 0 1027
ENST00000421386 SCG2-003 protein_coding Homo_sapiens 0 442
ENST00000433889 SCG2-002 protein_coding Homo_sapiens 0 401

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