C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C2 (subunit 9)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000185641 Atp5g2-001 ENSMUSG00000062683 10090 - 15:102662864-102671127 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000185641
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000185641 243.985±36.42 417.055±65.32 180.791±8.47 126.899±76.56 286.846±93.06 429.488±106.72 302.705±109.91 402.369±32.07 215.192±32.68 214.543±16.32 150.460±41.58 262.934±137.64 119.963±103.49 36.227±16.69

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009B4 CIL_0009B4_0002 VISTA 15:102394217-102994945
CIL_00061S CIL_00061S_0002 CGP 15:102525946-102672352
CIL_00003I CIL_00003I_0002 CGP 15:102662864-102722178

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005739 IEA mitochondrion
GO:0008289 IEA lipid binding
GO:0015078 IEA hydrogen ion transmembrane transporter activity
GO:0015986 IEA ATP synthesis coupled proton transport
GO:0015991 IEA ATP hydrolysis coupled proton transport
GO:0016021 IEA integral component of membrane
GO:0045263 IEA proton-transporting ATP synthase complex, coupling factor F(o)

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000338662 ATP5G2-002 protein_coding Homo_sapiens 0 584
ENST00000394349 ATP5G2-003 protein_coding Homo_sapiens 0 736
ENST00000429083 ATP5G2P3-001 processed_pseudogene Homo_sapiens 0 385
ENST00000433580 ATP5G2P1-001 processed_pseudogene Homo_sapiens 0 425
ENST00000442175 ATP5G2P4-001 processed_pseudogene Homo_sapiens 0 442
ENST00000495596 ATP5G2-001 retained_intron Homo_sapiens 0 640
ENST00000508850 RP11-77P16.1-001 processed_pseudogene Homo_sapiens 0 327
ENST00000549164 ATP5G2-006 protein_coding Homo_sapiens 0 617
ENST00000549748 ATP5G2-007 protein_coding Homo_sapiens 0 534
ENST00000552120 ATP5G2-008 retained_intron Homo_sapiens 0 226
ENST00000552242 ATP5G2-004 protein_coding Homo_sapiens 0 640
ENST00000602871 ATP5G2-010 protein_coding Homo_sapiens 0 704

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